WO2011002684A1 - Smac mimetic - Google Patents
Smac mimetic Download PDFInfo
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- WO2011002684A1 WO2011002684A1 PCT/US2010/039976 US2010039976W WO2011002684A1 WO 2011002684 A1 WO2011002684 A1 WO 2011002684A1 US 2010039976 W US2010039976 W US 2010039976W WO 2011002684 A1 WO2011002684 A1 WO 2011002684A1
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- 0 CC(O[C@](C1)CN[C@@]1C(*)(*)c1c(-c([n]c2c3)c(C(*)(*)[C@](C4)NC[C@]4OC(C)=O)c2ccc3F)[n]c2cc(F)ccc12)=O Chemical compound CC(O[C@](C1)CN[C@@]1C(*)(*)c1c(-c([n]c2c3)c(C(*)(*)[C@](C4)NC[C@]4OC(C)=O)c2ccc3F)[n]c2cc(F)ccc12)=O 0.000 description 4
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- C07D403/06—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
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- C07K5/06—Dipeptides
- C07K5/06008—Dipeptides with the first amino acid being neutral
- C07K5/06017—Dipeptides with the first amino acid being neutral and aliphatic
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Definitions
- This invention is in the field of SMAC mimetics and compositions and uses thereof to treat proliferative disorders including cancers.
- IAPs Inhibitors of Apoptosis Proteins
- SMAC also known as DIABLO
- DIABLO is another intracellular protein that functions to antagonize, i.e., inhibit the activity of IAPs.
- SMAC and IAPs function together to maintain healthy cells.
- IAPs are not adequately antagonized and therefore prevent apoptosis and cause or exacerbate abnormal proliferation and survival.
- SMAC mimetics also known as IAP antagonists, are synthetic small molecules that mimic the structure and IAP antagonist activity of the four N-terminal amino acids of SMAC.
- SMAC mimetics are sometimes referred to as IAP antagonists.
- the SMAC mimetics When administered to animals suffering proliferative disorders, the SMAC mimetics antagonize IAPs, causing an increase in apoptosis among abnormally proliferating cells.
- SMAC peptidomimetics are those disclosed in US 7,517,906; US 7,309,792; US 7,419,975; US 2005/0234042; US 2005/0261203; US 2006/0014700; US 2006/0025347; US 2006/0052311 ; US 2006/0128632; US 2006/0167066; US 2007/0042428; US 2007/032437; US 2008/0132485; WO 2005/069888; WO 2005/069894; WO 2006/0101 18; WO
- This invention in one aspect, is N- ⁇ lS-[2R-(6,6'-Difluoro-3'- ⁇ 4S-hydroxy-l-[2S-(2S- methylamino-propionylamino)-butyryl]-pyrrolidin-2R-ylmethyl ⁇ -lH,rH-[2,2']biindolyl-3- ylmethyl)-4S-hydroxy-pyrrolidine-l-carbonyl]-propyl ⁇ -2S-methylamino-propionamide and pharmaceutically acceptable salts thereof, as well as various forms of such compound and salts thereof as further described herein below.
- This compound has the following structure:
- R5 is -CH2CH3. This compound is also referred to herein as Compound 15.
- the invention in related aspects, comprises a pharmaceutical composition comprising such compound and a method of treating a proliferative disorder in a human or non-human mammalian subject in need thereof that comprises internally administering to the subject an effective amount of said compound or a pharmaceutically acceptable salt thereof.
- the invention comprises a method of treating a proliferative disorder in a mammal in need thereof, e.g., a human, or a companion animal, a food animal, or a sporting animal, that comprises internally administering to the animal an effective amount of Compound 15 or a pharmaceutically acceptable salt thereof.
- the invention comprises a method for inducing apoptosis in a cell comprising contacting the cell with Compound 15 or a pharmaceutically acceptable salt thereof.
- the cell can be, e.g., a cancerous cell.
- the invention comprises any one or more of the above methods that further comprises administering a second cancer-related therapy, such as, e.g., radiation, chemotherapy, immunotherapy, photodynamic therapy, and combinations thereof.
- a second cancer-related therapy such as, e.g., radiation, chemotherapy, immunotherapy, photodynamic therapy, and combinations thereof.
- the invention comprises a method of treating an autoimmune disease, in which the condition is caused or exacerbated by abnormal regulation of apoptosis, in a mammal in need thereof, including, for example, systemic lupus erythematosus, psoriasis, and idiopathic thrombocytopenic purpura (Morbus Werlhof) that comprises internally administering to the animal an effective amount of Compound 15 or a pharmaceutically acceptable salt thereof.
- a second cancer-related therapy such as, e.g., radiation, chemotherapy, immunotherapy, photodynamic therapy, and combinations thereof.
- the invention comprises a method of treating an autoimmune disease, in which the condition
- Figure 1 shows percent mean body weight loss in rat following 4 days of intravenous bolus dosing with SMAC mimetics substantially as described in Example 4.
- Figure 2 shows mean tumor volume (2A) and body weight change (2B) resulting from treatment of human xenografts in nude mice with SMAC mimetics substantially as described in Example 5.
- the compound of the invention is a SMAC mimetic that can be used in the treatment of proliferative disorders, e.g.: various benign tumors or malignant tumors (cancer), benign proliferative diseases (e.g., psoriasis, benign prostatic hypertrophy, and restenosis), or autoimmune diseases (e.g., autoimmune proliferative glomerulonephritis, lymphoproliferative autoimmune responses).
- proliferative disorders e.g.: various benign tumors or malignant tumors (cancer), benign proliferative diseases (e.g., psoriasis, benign prostatic hypertrophy, and restenosis), or autoimmune diseases (e.g., autoimmune proliferative glomerulonephritis, lymphoproliferative autoimmune responses).
- Cancers which potentially can be treated with IAP antagonists include, but are not limited to, one or more of the following: lung adenocarcinoma, pancreatic cancer, colon cancer, ovarian cancer, breast cancer, mesothelioma, peripheral neuroma, bladder cancer, glioblastoma, melanoma, adrenocortical carcinoma, AIDS-related lymphoma, anal cancer, bladder cancer, meningioma, glioma, astrocytoma, breast cancer, cervical cancer, chronic myeloproliferative disorders (e.g., chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lymphocytic leukemia, chronic lympho
- myelogenous leukemia myelogenous leukemia
- colon cancer endocrine cancers, endometrial cancer, ependymoma, esophageal cancer, Ewing's sarcoma, extracranial germ cell tumors, extragonadal germ cell tumors, extrahepatic bile duct cancer, gallbladder cancer, gastric cancer, gastrointestinal carcinoid tumors, gestational trophoblastic tumors, hairy cell leukemia, Hodgkin lymphoma, non-Hodgkin lymphoma, hypopharyngeal cancer, intraocular melanoma, islet cell carcinoma, Kaposi sarcoma, laryngeal cancer, leukemia, acute lymphoblastic leukemia, acute myeloid leukemia, lip cancer, oral cavity cancer, liver cancer, male breast cancer, malignant mesothelioma, medulloblastoma, melanoma, Merkel cell carcinoma, metastatic squam
- Some embodiments of the invention include inducing apoptosis of cells, particularly pathologically proliferating cells.
- the methods can be carried out in vitro or in vivo.
- the methods of the invention can include administration of the compound of the invention alone, administration of a combination of IAP antagonists, or administration of the compound of the invention, with or without one or more additional IAP antagonists, and one or more additional chemotherapeutic agents. Administration of multiple agents can be simultaneous or sequential.
- chemotherapeutic agents include, but are not limited to, alkylating agents (e.g., cyclophosphamide, mechlorethamine, chlorambucil, melphalan), anthracyclines (e.g., daunorubicin, doxorubicin, epirubicin, idarubicin, mitoxantrone, valrubicin), cytoskeletal disruptors (e.g., paclitaxel, docetaxel), epothilones (e.g., epothilone A, epothilone B, epothilone D), inhibitors of topoisomerase II (e.g., etoposide, teniposide, tafluposide), nucleotide analogs precursor analogs (e.g., azacitidine, azathioprine, capecitabine, cytarabine, doxifluridine, fluorouracil, gemcita
- camptothecin etoposide, topotecan, irinotecan, cisplatin, carboplatin, oxaliplatin, amsacrine, mitoxantrone, 5-fluoro-uracil, or gemcitabine.
- compositions comprising the compound of the invention, alone or in combination with one or more other active pharmaceutical ingredients, are administered to a human or veterinary subject.
- the pharmaceutical compositions typically comprise at least one pharmaceutically acceptable excipient, e.g., a carrier or diluent, and can be administered in the conventional manner by routes including systemic, topical, or oral routes. Administration is normally by intravenous injection, either as a bolus or infusion, but other routes of administration are not precluded.
- An intravenous formulation can be 1 mg/mL of Compound 15 in sterile 0.05M citrate buffered PBS, pH5. Specific modes of administration will depend on the indication and other factors including the particular compound being administered.
- the amount of compound to be administered is that amount which is therapeutically effective.
- the dosage to be administered will depend on the characteristics of the subject being treated, e.g., the particular patient treated, age, weight, health, types of concurrent treatment, if any.
- Frequency of treatments can be easily determined by one of skill in the art (e.g., by the clinician).
- the compound of the invention will be administered by intravenous injection, including, e.g., by infusion over about 1 to about 120 minutes, e.g., about 30 minutes.
- the pharmaceutical composition of the invention is a composition in which the active pharmaceutical ingredient, i.e., the compound of the invention, is pure enough, and the composition is otherwise suitable, for internal administration to a human or other mammal. It can be prepared in unit dose form, i.e., a form suitable for single administration to a subject. So, e.g., a pharmaceutical composition in intra-venous unit dose form may comprise a vial or pre-filled syringe, each comprising an effective amount or a convenient fraction of an effective amount such that one the contents of one vial or syringe are administered at a time. Such administration can be repeated up to about 4 times per day over a period of time, if necessary to achieve a cumulative effective dose, e.g., tumor regression.
- a cumulative effective dose e.g., tumor regression.
- a dosing regimen can be, e.g., daily or twice-weekly intravenous injections, or, e.g., weekly injections in cycles of three weeks on and one week off for as long as the treatment is effective, e.g., until disease progresses or the drug is not tolerated.
- the effective dose administered in each injection is an amount that is effective and tolerated; it can be, e.g., 0.01 to 30 mg/m , e.g., 0.2 to 10 mg/m , or, e.g., 0.5 to 5 mg/m .
- the compound of the invention can also be applied locally, such as in isolated limb perfusion.
- the compound of the invention can also be applied topically, e.g., as a cream, gel, lotion, or ointment, or in a reservoir or matrix-type patch, or in an active transdermal delivery system.
- An effective dose is one that over the course of therapy, which may be, e.g., 1 or more weeks, e.g., multiple courses of 3 weeks on/1 week off, results in treatment of the proliferative disorder, i.e., a decrease in the rate of disease progression, termination of disease progression, or regression or remission.
- Pharmaceutical compositions to be used comprise a therapeutically effective amount of a compound as described above, or a pharmaceutically acceptable salt or other form thereof together with one or more pharmaceutically acceptable excipients.
- pharmaceutical composition refers to a composition suitable for administration in medical use. It should be appreciated that the determinations of proper dosage forms, dosage amounts, and routes of administration for a particular patient are within the level of ordinary skill in the pharmaceutical and medical arts.
- compositions suitable for parenteral administration conveniently comprise a sterile aqueous preparation of the compound of the invention, which is preferably isotonic with the blood of the recipient.
- This aqueous preparation may be formulated according to known methods using suitable carriers or diluents which may include a buffer.
- the administration of the compound and compositions of the present invention can occur simultaneous with, subsequent to, or prior to chemotherapy or radiation, so long as the chemotherapeutic agent or radiation sensitizes the system to the compound and compositions of the present invention.
- the present invention also is directed to the use of the compound and compositions as a chemopotentiating agent with other treatment approaches.
- chemopotentiating agent refers to an agent that acts to increase the sensitivity of an organism, tissue, or cell to a chemical compound, or treatment namely "chemotherapeutic agents” or “chemo drugs” or to radiation treatment.
- compound and compositions of the present invention can be used for inhibiting tumor growth in vivo by administering them in combination with a biologic or chemotherapeutic agent or by using them in combination with radiation.
- the administration of the compound and compositions of the present invention may occur prior to, and with sufficient time, to cause sensitization of the site to be treated.
- the compound and compositions of the present invention may be used contemporaneously with radiation and/or additional anti-cancer chemical agents (infra).
- additional anti-cancer chemical agents infra
- Such systems can avoid repeated administrations of the compound and compositions of the present invention, increasing convenience to the subject and the physician, and may be particularly suitable for certain compositions of the present invention.
- Biological and chemotherapeutics/anti-neoplastic agents and radiation induce apoptosis by activating the extrinsic or intrinsic apoptotic pathways, and, since the compound and compositions of the present invention relieve antagonists of apoptotic proteins (IAPs) and, thus, remove the block in apoptosis, the combination of chemotherapeutics/anti-neoplastic agents and radiation with the compound and compositions of the present invention should work additively or synergistically to facilitate apoptosis.
- IAPs antagonists of apoptotic proteins
- chemotherapeutic/anti neoplastic agent and/or radiation therapy of any type that activates the extrinsic or intrinsic pathway may provide a more effective approach to destroying tumor cells.
- the compound of the present invention interacts with IAP's, such as XIAP, cIAP-1, cIAP-2, ML-IAP, etc., and removes the IAP mediated block of apoptosis.
- chemotherapeutics/anti neoplastic agents and/or radiation therapy kills actively dividing cells by activating the intrinsic apoptotic pathway leading to apoptosis and cell death.
- Biological antitumor agents such as TRAIL (TNF-related apoptosis inducing ligand) activate extrinsic apoptotic pathways.
- TRAIL TNF-related apoptosis inducing ligand
- embodiments of the invention provide combinations of the compound of the present invention and a biological or chemotherapeutic/anti-neoplastic agent and/or radiation which provide a synergistic action against unwanted cell proliferation.
- This synergistic action between the compound of the present invention and a biological or chemotherapeutic/anti-neoplastic agent and/or radiation therapy can improve the efficiency of the biological or chemotherapeutic/anti-neoplastic agent and/or radiation therapies.
- This will allow for an increase in the effectiveness of current biological or chemotherapeutic/anti-neoplastic agents or radiation treatments allowing a higher percentage of tumors to respond to the therapy, an improved tumor response, and, potentially, a reduction in the dose of the biological or chemotherapeutic/anti-neoplastic agent needed to treat a tumor, thereby providing the use of a more tolerable dose of biological or chemotherapeutic/anti-neoplastic agent and/or radiation.
- the patient is treated by administering the compound or a pharmaceutical composition of the present invention at a time the patient is subject to concurrent or antecedent radiation or chemotherapy for treatment of a
- the compound or a composition of the present invention can be administered in combination with a biological or chemotherapeutic and/or for use in combination with radiotherapy, immunotherapy, and/or photodynamic therapy, promoting apoptosis and enhancing the effectiveness of the chemotherapeutic, radiotherapy, immunotherapy, and/or photodynamic therapy.
- chemotherapeutic agent Such biological or chemotherapeutic agents include but are not limited to the chemotherapeutic agents described in "Modern Pharmacology with Clinical Applications", Sixth Edition, Craig & Stitzel, Chpt. 56, pg 639-656 (2004), herein incorporated by reference.
- the chemotherapeutic agent can be, but is not limited to, alkylating agents, antimetabolites, anti-tumor antibiotics, plant-derived products such as taxanes, enzymes, hormonal agents, miscellaneous agents such as cisplatin, monoclonal antibodies, glucocorticoids, mitotic inhibitors, topoisomerase I inhibitors, topoisomerase II inhibitors, immunomodulating agents such as interferons, cellular growth factors, cytokines, and nonsteroidal anti-inflammatory compounds (NSAID), cellular growth factors and kinase inhibitors.
- Other suitable classifications for chemotherapeutic agents include mitotic inhibitors,and anti-estrogenic agents.
- Suitable biological and chemotherapeutic agents include, but are not limited to, cisplatin, carmustine (BCNU), 5-fluorouracil (5-FU), cytarabine (Ara-C), gemcitabine, methotrexate, daunorubicin, doxorubicin, dexamethasone, topotecan, etoposide, paclitaxel, vincristine, tamoxifen, TNF-alpha, TRAIL and other members, i.e., other than TRAIL and TNF-alpha, of the TNF superfamily of molecules., interferon (in both its alpha and beta forms), thalidomide, thalidomide derivatives such as lenalidomide, melphalan, and PARP inhibitors.
- chemotherapeutic agents include nitrogen mustards such as cyclophosphamide, alkyl sulfonates, nitrosoureas, ethylenimines, triazenes, folate antagonists, purine analogs, pyrimidine analogs, anthracyclines, bleomycins, mitomycins, dactinomycins, plicamycin, vinca alkaloids, epipodophyllotoxins, taxanes, glucocorticoids, L-asparaginase, estrogens, androgens, progestins, luteinizing hormones, octreotide actetate, hydroxyurea, procarbazine, mitotane, hexamethylmelamine, carboplatin, mitoxantrone, monoclonal antibodies, levamisole, interferons, interleukins, filgrastim and sargramostim.
- nitrogen mustards such as cyclophosphamide, al
- Another embodiment of the present invention relates to the use of the compound or a composition of the present invention in combination with topoisomerase inhibitors to potentiate their apoptotic inducing effect.
- Topoisomerase inhibitors inhibit DNA replication and repair, thereby promoting apoptosis and are used as chemothemotherapeutic agents.
- Topoisomerase inhibitors promote DNA damage by inhibiting the enzymes that are required in the DNA repair process. Therefore, export of Smac from the mitochondria into the cell cytosol is provoked by the DNA damage caused by topoisomerase inhibitors.
- Topoisomerase inhibitors of both the Type I class (camptothecin, topotecan, SN-38 (irinotecan active metabolite) and the Type II class (etoposide) are expected to show potent synergy with compounds of the present invention.
- Further examples of topoisomerase inhibiting agents that may be used include, but are not limited to, irinotecan, topotecan, etoposide, amsacrine, exatecan, gimatecan, etc.
- Other topoisomerase inhibitors include, for example,
- Aclacinomycin A camptothecin, daunorubicin, doxorubicin, ellipticine, epirubicin, and mitaxantrone.
- Another embodiment of the present invention relates to the use of the compound or a composition of the present invention in combination with nonsteroidal antiinflammatory drugs (NSAIDs).
- NSAIDs nonsteroidal antiinflammatory drugs
- the chemotherapeutic/anti -neoplastic agent for use in combination with the compound and compositions of the present invention may be a platinum containing compound.
- the platinum containing compound is cisplatin.
- Cisplatin can synergize with a compound of the present invention and potentiate the inhibition of an IAP, such as but not limited to XIAP, cIAP-1, c-IAP-2, ML- IAP, etc.
- a platinum containing compound is carboplatin.
- Carboplatin can synergize with a compound of the present invention and potentiate the inhibition of an IAP, including, but not limited to, XIAP, cIAP-1, c-IAP-2, ML-IAP, etc.
- a platinum containing compound is oxaliplatin.
- the oxaliplatin can synergize with a compound of the present invention and potentiate the inhibition of an IAP, including, but not limited to, XIAP, cIAP-1, c-IAP-2, ML-IAP, etc.
- DNA modifying agents may be any highly reactive chemical compound that bonds with various nucleophilic groups in nucleic acids and proteins and cause mutagenic, carcinogenic, or cytotoxic effects.
- DNA modifying agents work by different mechanisms, disruption of DNA function and cell death; DNA damage/the formation of cross-bridges or bonds between atoms in the DNA; and induction of mispairing of the nucleotides leading to mutations, to achieve the same end result.
- Three non-limiting examples of a platinum containing DNA modifying agents are cisplatin, carboplatin and oxaliplatin.
- Yet another embodiment of the present invention is the therapeutic combination or the therapeutic use in combination of the compound or compositions of the present invention with TRAIL or TRAIL agonist antibodies, or other chemical or biological agents which bind to and activate the TRAIL receptor(s).
- TRAIL or TRAIL agonist antibodies or other chemical or biological agents which bind to and activate the TRAIL receptor(s).
- Many cancer cell types are sensitive to TRAIL- induced apoptosis, while most normal cells appear to be resistant to this action of TRAIL.
- TRAIL-resistant cells may arise by a variety of different mechanisms including loss of the receptor, presence of decoy receptors, overexpression of FLIP which competes for zymogen caspase-8 binding during DISC formation and inhibition of activated caspase-3 and/or caspase-9 by XIAP.
- a compound or composition of the present invention may increase tumor cell sensitivity to TRAIL leading to enhanced cell death, the clinical correlations of which are expected to be increased apoptotic activity in TRAIL resistant tumors, improved clinical response, increased response duration, and ultimately, enhanced patient survival rate.
- Compound 15 is administered in combination with a cytokine, e.g., TNF ⁇ .
- a cytokine e.g., TNF ⁇ .
- the compound and compositions of the present invention also can be used to augment radiation therapy (or radiotherapy), i.e., the medical use of ionizing radiation as part of cancer treatment to control malignant cells.
- radiotherapy is often used as part of curative therapy, it is occasionally used as a palliative treatment, where cure is not possible and the aim is for symptomatic relief.
- Radiotherapy is commonly used for the treatment of tumors. It may be used as the primary therapy. It is also common to combine radiotherapy with surgery and/or chemotherapy.
- the most common tumors treated with radiotherapy are breast cancer, prostate cancer, rectal cancer, head & neck cancers, gynecological tumors, bladder cancer and lymphoma. Radiation therapy is commonly applied just to the localized area involved with the tumor.
- the radiation fields also include the draining lymph nodes. It is possible but uncommon to give radiotherapy to the whole body, or entire skin surface. Radiation therapy is usually given daily for up to 35-38 fractions (a daily dose is a fraction). These small frequent doses allow healthy cells time to grow back, repairing damage inflicted by the radiation.
- Three main divisions of radiotherapy are external beam radiotherapy or teletherapy, brachytherapy or sealed source radiotherapy and unsealed source radiotherapy, which are all suitable examples of treatment protocol in the present invention. The differences relate to the position of the radiation source; external is outside the body, while sealed and unsealed source radiotherapy has radioactive material delivered internally. Brachytherapy sealed sources are usually extracted later, while unsealed sources are injected into the body.
- Compound 15 is capable of forming pharmaceutically acceptable salts, including but not limited to acid addition and/or base addition salts. Such salts are included within all aspects of the invention.
- the present invention encompass Compound 15 synthesized in vitro using laboratory techniques, such as those well known to synthetic chemists; or synthesized using in vivo techniques, such as through metabolism, fermentation, digestion, and the like. It is also contemplated that the compound of the present invention maybe synthesized using a combination of in vitro and in vivo techniques.
- the present invention also includes isotopically-enriched compounds, which are identical to Compound 15 but for the fact that one or more atoms are replaced by an atom having an atomic mass or mass number different from the atomic mass or mass number usually found in nature.
- isotopes that can be included in the invention include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine and chlorine, such as 2 H, 3 H, 13 C, 14 C, 15 N, 16 O, 17 0, 31 P, 32 P, 35 S, 18 F, and 36 Cl. Substitution with heavier isotopes such as deuterium, i.e., 2 H, are also included.
- Isotopically enriched compounds of this invention can generally be prepared by substituting a readily available isotopically labelled reagent for a non-isotopically enriched reagent.
- incorporation of deuterium can be accomplished by substituting sodium borohydride with ⁇ -sodium borohydride, or by replacing iodomethane with ⁇ /3-iodomethane. Representative examples of specific deuterated analogs and their preparation are described in Example 1.
- Compound 15 may exist in unsolvated forms as well as solvated forms, including hydrated forms. Furthermore, Compound 15 may exist in various solid states including crystalline, semi-crystalline and amorphous (noncrystalline) forms, and in the form of clathrates, prodrugs, polymorphs, bio-hydrolyzable esters, racemic mixtures, non-racemic mixtures, or as purified stereoisomers including, but not limited to, optically pure enantiomers and diastereomers. In general, all of these and other such forms are intended to be encompassed within the scope of the term, Compound 15.
- references to Compound 15 and to the compound of the invention, and other similar phrases in this specification and in the claims, are intended to include not only the compound of formula (I), but also pharmaceutically acceptable salts of Compound 15, as well as various forms of said compound or salts thereof such as those that are described above and below.
- the invention comprises compounds useful as intermediates in the synthesis of Compound 15, as well as in processes for preparing such intermediates and Compound 15.
- the invention comprises compounds shown in the Examples, below, such as Compounds 9, 10, 1 1, 12, 13, 14, and the isotopically enriched compounds such as Compounds 18 through 32.
- One such embodiment is
- Compound 15 in which the 4-OH substituent on the pyrrolidine moiety is protected with a protecting group is an illustrative protecting group, which is illustrated in Compounds 11-14, below.
- Other useful protecting groups will be apparent to persons of skill in the art and include, e.g., benzoyl, benzyl, trimethylsilyl, and triphenylmethyl groups.
- the protecting group is removed, e.g., by contacting the protected intermediate with an acid or a base, as shown in Schemes XIII and XIV, below.
- the invention comprises the compound having the structure of Compound 15 as well as protected versions of Compound 15 such as Compounds 13 and 14 in which the N-termini are protected with carbamate moieties and/or free hydroxyl groups are protected as esters such compounds being herein referred to as Protected Compound 15.
- the invention further comprises the step of deprotecting a Protected Compound 15 by contacting the Protected Compound 15 with an acid or base whereby the Protecting Group is removed to afford Compound 15.
- Isotopically enriched compounds of the invention include deuterated forms of Compound 15 such as Compounds 20, 29, and 32. Protected forms of such compounds, e.g., Compounds 19, 28, and 31, are also comprised within the invention.
- 6-Fluoroindole (39.2 g, 290 mmol) was dissolved in anhydrous chlorobenzene (300 niL) and toluene (200 mL) and the solution was cooled to -4 0 C using an ice/acetone bath.
- a solution of 3M EtMgBr in diethyl ether (101 g, 294 mmol) was added over 31 minutes at ⁇ 2.5 0 C resulting in a pale amber-colored solution.
- the acid chloride/toluene solution (vide supra) was added over 45 minutes at ⁇ 2 0 C.
- the reaction mixture was kept cold for 1 h then allowed to slowly warm. After ca.
- the Celite® pad was further rinsed with THF (100 mL) which was concentrated in vacuo to provide another 1.12 g of 9 as a beige-colored solid.
- the combined solids were dissolved in isopropyl acetate (iPrAc, 50 mL).
- iPrAc isopropyl acetate
- the iPrAc solution was reduced to ca. 20 mL and resulting suspension was warmed to reflux, cooled to ambient temperature, and then placed in an ice-bath. After 1 h, the solid was collected by vacuum filtration, washed with iPrAc (10 mL) and dried in a vacuum oven to afford 2.13 g (65%, 2 steps) of 9 as a beige- colored solid [Note: -100 A% by HPLC analysis].
- reaction mixture was slowly warmed to ambient temperature. After 16 h, the reaction mixture was diluted with MTBE (1000 mL) and the heterogeneous mixture was washed with water (500 mL). The layers were separated and the organic phase formed a heterogeneous suspension. MTBE (1000 mL) and EtOAc (500 mL) were added and the now-homogeneous solution was washed successively with 1 N HCl (2 x 100 mL), saturated aqueous NaHCO 3 (2 x 100 mL), brine, dried over anhydrous Na 2 SO 4 , filtered, and concentrated. The residue was dissolved in 1 :1 DCM/ MeOH (600 mL) and DCM (ca.
- the reaction mixture was degassed and maintained under a nitrogen atmosphere wrapped with aluminum foil. The ice-bath was removed. After 60 min, the MeOH was removed in vacuo and the residue was diluted with water (200 mL) and extracted with EtOAc (500 mL). The aqueous phase was separated and back-extracted with EtOAc (2 x 150 mL). The combined organic extracts were washed with brine and dried over anhydrous Na 2 SO 4 , filtered, and concentrated to afford 22.5 g of crude 15 as a light, brown/yellow-colored solid.
- the crude 15 (22.5 g) was dissolved in McOH (50 mL) and EtOAc (200 mL). The volume was reduced (50%) by distillation at reduced pressure at 60 0 C using a rotary evaporator. MTBE (300 mL) was added and the cloudy solution was warmed to 60 0 C. After 30 min, the solution was cooled to ambient temperature and then maintained at -5 0 C.
- the DCM layer was separated and washed successively with dilute HCl (50 mL), water (50 mL), and brine (50 mL). The organic solution was dried over anhydrous Na 2 SO 4 , filtered, and concentrated. The crude product was purified by flash silica gel chromatography [30-40% EtOAc in hexane] to afford 2.0 g (62%, 2 steps) of 22 as a white foam.
- the reaction mixture was slowly warmed to ambient temperature. After 16 h, the reaction mixture was diluted with diethyl ether (100 mL) and the mixture was washed successively with water (5 x 50 mL), IN HCl (50 mL), saturated aqueous NaHCO 3 (50 mL), and brine, dried over anhydrous Na 2 SO 4 , filtered, and concentrated.
- the crude product was purified by reverse- phase HPLC (Dynamax 2" Cl 8 column; 10-100% ACN/water containing 0.1% HOAc over 30 min; 40 mL/min). The product- containing fractions were combined, concentrated, and lyophilized to afford 310 mg of 25 (70%, 2 steps) as a flocculent white solid.
- Acetic acid 5 (3'- ⁇ 4-acetoxy-l -[2-(2-methyl-ftert-butoxycarbonyl)-amino-propionylamino)- butyryli-pyrrolidin-2-yl- ⁇ -methvU -6,6'-difluoro- 1 H.1 ⁇ -[2,2'1biindolyl-3-yl- J r methylVl - [2-(2-methyl-(tert-butoxycarbonyl)-amino-propionylamino)-butyryl1-pyrrolidin-3-yl ester (27): To a solution containing Boc-N(Me)Ala-OH (83 mg, 0.41 mmol) and HATU (172 mg, 0.45 mmol) in anhydrous NMP (5 mL) at 0 0 C was added NMM (0.1 mL, 0.85 mmol) followed by addition of crude 26 (123 mg, 0.17 mmol) in NMP
- the reaction mixture was degassed and maintained under a nitrogen atmosphere wrapped with aluminum foil. The ice-bath was removed. After 60 min, the MeOH was removed in vacuo and the residue was diluted with water (20 mL) and extracted with EtOAc (50 mL). The aqueous phase was separated and back-extracted with EtOAc (2 x 50 mL). The combined organic extracts were washed with brine and dried over anhydrous Na 2 SO 4 , filtered, and concentrated. The crude product was purified by reverse-phase HPLC (Dynamax 2" Cl 8 column; 10-100% ACN/water containing 0.1% HOAc over 30 min; 40 mL/min).
- the reaction mixture was degassed and maintained under a nitrogen atmosphere wrapped with aluminum foil. The ice-bath was removed. After 60 min, the MeOH was removed in vacuo and the residue was diluted with water (20 mL) and extracted with EtOAc (50 mL). The aqueous phase was separated and back-extracted with EtOAc (2 x 50 mL). The combined organic extracts were washed with brine and dried over anhydrous Na 2 SO 4 , filtered, and concentrated. The crude product was purified by reverse-phase HPLC (Dynamax 2" Cl 8 column; 10-100% ACN/water containing 0.1% HOAc over 30 min; 40 mL/min).
- the concentration inducing degradation of cIAP-1 and cIAP-2 by 50% (IC 50 ) for various compounds was determined by monitoring the disappearance of Green Fluorescent Protein (GFP)-signal in A375 cells.
- GFP Green Fluorescent Protein
- A375 cell lines expressing GFP-tagged cIAP-1 and cIAP-2 were generated by transfecting HA2xEGFP-pcDNA3 vector containing either cIAP-1 (A375Gcl) or cIAP-2 (A375Gc2) coding region. 2xlO 4 of A375Gcl or A375Gc2 cells were grown in 96-well plate and treated with various concentrations of test compounds for 2 h.
- IC 50 is defined as the concentration of drug at which 50% of GFP signal was inhibited.
- Exponentially growing MDA-MB-231 tumor cells were harvested by trypsinization and collected by centrifugation in a table top centrifuge at 1000xg for 10 minutes at room temperature. Cell pellet was washed one time by resuspending in 5 mL hypotonic lysis buffer (20 mM HEPES, pH7.5, 10 mM KCl, 1.5 mM MgCl 2 , 1.0 mM EDTA, 1.0 mM DTT) and recollected by centrifugation. Pellet was next resuspended in 1 volume of hypotonic lysis buffer supplemented with a complete protease inhibitor tablet (Roche) and allowed to swell on ice for 30 minutes.
- hypotonic lysis buffer (20 mM HEPES, pH7.5, 10 mM KCl, 1.5 mM MgCl 2 , 1.0 mM EDTA, 1.0 mM DTT
- Endogenous XIAP inhibits much of this activity and addition of test compound to the activated lysate results in more caspase activity than is generated by activated lysate alone as measured by increase in fluorescence intensity upon cleavage of zD E VD-Rl 10( 2 ) by caspase- 3.
- IC 50 values were calculated using GraphPad Prism by plotting increase in fluorescence intensity vs. different concentrations of compounds tested and the results are shown in Table 3.
- MTT 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide
- MTT 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide
- SK-OV-3 cells were seeded in 96- well plates in McCoy's medium containing 10% fetal bovine serum albumin (5,000 per well) and incubated overnight at 37°C.
- test compounds were added at various concentrations (0.003-10 ⁇ M) and the plates were incubated at 37°C for an additional 72 hrs. This incubation time was optimal for measuring inhibitory effects of different analogs. Fifty microliters of 5mg/mL MTT reagent to each well was added and the plates were incubated at 37°C for 3 hours. At the end of the incubation period, 50 microliters of DMSO was added to each well to dissolve cells and the optical density (OD) of the wells was measured using a microplate reader (Victor 2 1420, Wallac, Finland) at 535 nm. Cell survival (CS) was calculated by the following equation:
- the CC 50 defined as the drug concentration that results in 50% CS, was derived by calculating the point where the dose-response curve crosses the 50% CS point using
- Body weight loss (BWL), mortality and additional toxicity data were generated substantially as follows. Sprague-Dawley rats were dosed daily (QDx4, i.v. bolus slow push) with
- Compounds 15, 4 and 5 Body weights were taken on day 4 and are shown as percent change from day 1. Compounds 4 and 5 were administered at 0.3 mg/Kg, 1 mg/Kg, or 3 mg/Kg;
- Compound 15 was administered at 1 , 5, or 10 mg/Kg.
- Body Weight At 1 mg/Kg, animals receiving Compounds 4 and 5 lost weight whereas animals receiving Compound 15 at 1 mg/kg/day gained weight. At 5 mg/kg/day with Compound 15, a treatment related mean body weight loss of approximately 8% was noted from day 1 to day 4. A treatment-related mean body weight loss of approximately 4 % and 6 % was noted in animals treated with Compounds 4 and 5, respectively, at 1 mg/kg/day.
- Pathology Assessment of anatomic pathology after treatment with Compounds 4 and 5 at 1 mg/kg/day resulted in the following findings.
- hypotrophied bronchiolar epithelium proliferating perivascular mononuclear cells and hypertrophied visceral pleural cells.
- assessment of anatomic pathology following treatment with Compound 15 at the same dose (1 mg/kg/day) identified minimal to mild hypocellularity of erythroid cells, minimal to mild hypercellularity of myeloid cells, and minimal Type 2 pneumocyte hypertrophy in the lungs.
- MDA-MB-231 xenograft data were generated substantially as follows.
- MDA-MB-231 human breast tumor cells were injected into the mammary fat pad of female nude mice and dosing initiated twelve days later at an average tumor volume of approximately 148 mm 3 . No tumor burden was associated with this model based on lack of weight loss or animal morbidity in control groups.
- Mice were injected subcutaneously into the mammary fat pad with 1x10 7 cells suspended in 200 ⁇ l of a 1 :1 HBSS: Matrigel solution ; injected cells were within nine passages of the original lot.
- Pre-study tumor volumes were recorded beginning approximately one week prior to the estimated start date. When tumors reached
- mice are matched by tumor volume into treatment and control groups and dosing initiated (Day 0); mice are tagged and followed individually throughout the experiment. Animals were dosed by weight (0.01 mL per gram; 10 ml/Kg).
- mice were observed daily and weighed twice weekly using a digital scale (Ohaus SP601); data including individual and mean gram weights (Mean We ⁇ SD), mean percent weight change versus Day 0 (%vDo) and mean percent weight change versus prior measurement (%vD. x ) were recorded for each group and plotted at study completion.
- tumor dimensions were measured twice weekly by digital caliper (Fowler Ultra-Cal IV) and data including individual and mean estimated tumor volumes (Mean TV ⁇ SEM) recorded for each group; tumor volume was calculated using the formula: TV ⁇ width ' x length x 0.52.
- TTE time to endpoint
- TGD tumor growth delay
- LTS long-term survivors
- TTE tumor-free animals are not included in TGD calculations.
- mice lacking palpable tumors were classified as complete responders (CR); a CR that persisted until study completion was considered a tumor-free survivor (TFS); TFS animals are excluded from TGD calculations and statistical analysis.
- CR complete responders
- TFS tumor-free survivor
- 6/10 mice were considered long-term survivors and partial tumor regression was reported in three mice.
- 40 mg/Kg group 9/10 mice were considered long-term survivors and partial tumor regression was reported in three mice.
- Compound 5 was administered by i.p.
- Compound 15 at 20 mg/Kg had comparable anti-tumor activity to Compound 5 at 15 mg/Kg. Subsequent studies have shown that the minimal effective dose of Compound 15 in this model is less than 1 mg/Kg. Weight loss was greater in the mice administered Compound 5 at 15 mg/Kg when compared to the mice dosed with Compound 15 at 20 mg/Kg. Thus, Compound 15 has comparable efficacy with less toxicity relative to Compound 5 and therefore has an improved therapeutic index.
- the compound of Formula 1 is particularly well tolerated and well suited for use in a pharmaceutical composition, as well as in a method for treating a proliferative disorder or an autoimmune disorder.
- the pharmaceutical composition of the invention for the treatment of a proliferative disorder which comprises an effective amount of Compound 15 in addition to at least one pharmaceutically acceptable excipient, can improve therapeutic index by reducing toxicities.
- the reduced toxicities include, e.g., one of, or any combination of one or more of:
- the reduced toxicities listed above are those observed in the animals tested. Similar, additional, or different reduced toxicities will be observed in humans.
- the reductions are relative, e.g., relative to the extent that toxicities would be observed following internal administration of a pharmaceutical composition in which the active pharmaceutical ingredient is an analog of Compound 15, e.g., one or more of the analogs in which R5 is -CH2CH3, - CH(CH3)CH3, -tf-CH(OH)CH3, -S-CH(OH)CH3, and -7?-CH(OCH3)CH3, e.g., at the same dose or at a dose of comparable potency.
- the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and the scope of the appended claims.
Abstract
Description
Claims
Priority Applications (20)
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CA2766162A CA2766162C (en) | 2009-07-02 | 2010-06-25 | Smac mimetic |
BRPI1013958-3A BRPI1013958B1 (en) | 2009-07-02 | 2010-06-25 | smac mimetic compounds for the treatment of proliferative disorders including cancers, pharmaceutical composition comprising said compounds and therapeutic uses thereof, as well as process for preparing a smac mimetic compound |
NZ597051A NZ597051A (en) | 2009-07-02 | 2010-06-25 | Smac mimetic |
ES10794587.5T ES2565337T3 (en) | 2009-07-02 | 2010-06-25 | SMAC mimetic |
AU2010266525A AU2010266525C1 (en) | 2009-07-02 | 2010-06-25 | SMAC mimetic |
US13/382,075 US20120115922A1 (en) | 2009-07-02 | 2010-06-25 | Smac mimetec |
JP2012518560A JP5674780B2 (en) | 2009-07-02 | 2010-06-25 | SMAC mimic |
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CN201080031798.6A CN102471275B (en) | 2009-07-02 | 2010-06-25 | SMAC mimetic |
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SG2011096948A SG177404A1 (en) | 2009-07-02 | 2010-06-25 | Smac mimetic |
EP10794587.5A EP2448923B8 (en) | 2009-07-02 | 2010-06-25 | Smac mimetic |
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IL217237A IL217237A (en) | 2009-07-02 | 2011-12-27 | Smac mimetic compounds, compositions comprising the same and uses thereof |
HK12110211.8A HK1169410A1 (en) | 2009-07-02 | 2012-10-16 | Smac mimetic smac |
HK12111923.5A HK1171022A1 (en) | 2009-07-02 | 2012-11-22 | Smac mimetic smac |
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